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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1634
candidate regulatory elements
1197
target gene predictions
977
histone modifications
817
binding sites
642
accessible chromatin
140
eQTL
139
variant allelic effects
74
chromatin state
43
gene expression
11
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
2
Fine-mapped variants
2
variant to gene
1
pQTL
Date released
2394
February, 2021
1640
September, 2022
310
February, 2024
295
May, 2021
288
June, 2020
152
May, 2020
105
January, 2022
99
October, 2022
74
August, 2021
66
January, 2020
49
May, 2022
48
March, 2020
44
November, 2022
34
August, 2017
30
February, 2023
17
February, 2020
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
4
March, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5450
bed bed3+
bed bed9
tsv
277
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5649
Homo sapiens
Biosample type
2142
cell line
1888
tissue
1305
primary cell
355
in vitro differentiated cells
4
stem cell
Organ
419
epithelium
333
brain
321
kidney
295
connective tissue
279
musculature of body
228
lung
212
intestine
192
bodily fluid
183
blood
177
limb
176
embryo
170
heart
161
vasculature
158
skin of body
148
pancreas
133
large intestine
125
blood vessel
110
extraembryonic component
109
liver
94
eye
85
stomach
75
uterus
68
bone element
67
mammary gland
64
prostate gland
small intestine
59
adipose tissue
55
placenta
54
lymph node
54
penis
51
artery
51
ureter
48
adrenal gland
38
gonad
37
thymus
32
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
15
nerve
15
skeleton
14
mouth
12
pituitary gland
11
bronchus
10
breast
10
lymphatic vessel
9
bone marrow
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5695
AMP
329
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5524
hg19
564
GRCh38
4
hg18
files.file_type!
tsv
bed bed9
organ_slims!
small intestine
BIOSAMPLE
TYPE
5695 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
hQTL
sQTL
meQTL
other
Fine-mapped variants
variant to gene
pQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 761 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
1
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
2
1
lung
33
17
1
+ See 226 more…
primary cell
monocyte
1
86
1
17
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
1
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 273 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
embryonic stem cell
1
1
1
6
mesenchymal stem cell
3
3
1
1
1
+ See 106 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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