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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1523
candidate regulatory elements
1258
target gene predictions
929
histone modifications
868
accessible chromatin
801
binding sites
126
eQTL
123
variant allelic effects
68
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2285
February, 2021
1520
September, 2022
329
November, 2021
311
February, 2024
284
May, 2021
267
June, 2020
133
May, 2020
95
October, 2022
87
January, 2022
79
August, 2021
56
January, 2021
49
May, 2022
48
January, 2020
46
March, 2020
44
November, 2022
31
February, 2023
28
August, 2017
19
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
3
September, 2018
2
November, 2020
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5550
bed bed3+
tsv
bed bed9
523
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5737
Homo sapiens
Biosample type
2085
cell line
1681
primary cell
1661
tissue
352
in vitro differentiated cells
3
stem cell
Organ
575
epithelium
354
connective tissue
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
180
heart
178
embryo
177
limb
170
vasculature
168
skin of body
139
large intestine
130
blood vessel
114
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
15
nerve
15
skeleton
14
bronchus
14
lymphatic vessel
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5362
AMP
329
ENCODE
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5626
hg19
858
GRCh38
4
hg18
files.file_type!
tsv
bed bed9
organ_slims!
small intestine
brain
BIOSAMPLE
TYPE
5784 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 747 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
1
2
1
2
B cell
14
10
6
+ See 334 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
lung
33
17
1
muscle of arm
33
16
1
1
+ See 169 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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