Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
638
binding sites
581
histone modifications
391
target gene predictions
317
candidate regulatory elements
187
chromatin state
159
accessible chromatin
10
eQTL
9
differential activity
4
variant allelic effects
Date released
1290
February, 2021
530
September, 2022
166
February, 2024
148
June, 2020
69
October, 2022
53
May, 2021
10
January, 2022
9
March, 2023
7
May, 2022
5
August, 2017
4
March, 2020
2
May, 2020
1
August, 2021
1
January, 2020
1
November, 2019
Available data
2095
bed bed3+
175
bed bed9
tsv
7
bed bed9+
4
bigWig
Organism
2296
Homo sapiens
Biosample type
2308
tissue
2296
cell line
1874
primary cell
395
in vitro differentiated cells
4
stem cell
Organ
205
bodily fluid
195
blood
119
embryo
96
lung
77
brain
70
skin of body
65
uterus
62
lymph node
53
bone element
53
prostate gland
38
kidney
36
mammary gland
34
epithelium
34
intestine
large intestine
31
connective tissue
28
liver
25
pancreas
17
musculature of body
15
penis
10
eye
10
pituitary gland
10
vasculature
8
heart
7
gonad
7
limb
7
testis
6
lymphoid tissue
5
blood vessel
4
mouth
3
adipose tissue
3
artery
3
extraembryonic component
3
placenta
3
spinal cord
2
lymphatic vessel
2
vein
Project
2287
AMP
9
community
Genome assembly (visualization)
2276
hg19
359
GRCh38
1
hg18
files.file_type!
tsv
organ_slims!
large intestine
BIOSAMPLE
TYPE
2296 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
eQTL
differential activity
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
1
H1-hESC
2
1
39
1
1
1
K562
2
1
23
7
7
1
MCF-7
3
2
6
9
5
1
+ See 754 more…
See all biosamples
Download