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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
19
accessible chromatin
17
chromatin state
14
histone modifications
13
binding sites
7
eQTL
4
gene expression
4
variant allelic effects
1
caQTL
Date released
46
September, 2022
22
February, 2021
16
February, 2024
10
August, 2021
7
March, 2020
June, 2020
5
November, 2021
3
August, 2017
3
May, 2020
3
May, 2021
2
January, 2020
2
May, 2022
1
January, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
96
bed bed3+
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
123
Homo sapiens
Biosample type
50
tissue
43
primary cell
26
cell line
4
in vitro differentiated cells
Organ
600
epithelium
386
kidney
378
brain
375
connective tissue
355
musculature of body
304
lung
276
intestine
221
heart
limb
205
bodily fluid
197
pancreas
196
vasculature
195
embryo
194
blood
194
skin of body
165
large intestine
153
blood vessel
140
extraembryonic component
123
liver
114
stomach
101
eye
83
mammary gland
83
small intestine
80
bone element
79
uterus
72
prostate gland
71
adrenal gland
71
placenta
66
adipose tissue
63
ureter
61
penis
56
artery
54
lymph node
48
thymus
44
gonad
41
esophagus
36
spinal cord
32
spleen
23
testis
21
lymphoid tissue
21
ovary
21
thyroid gland
21
vein
18
nerve
18
skeleton
17
mouth
15
bronchus
15
lymphatic vessel
13
bone marrow
12
pituitary gland
11
breast
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
118
AMP
5
ENCODE
Genome assembly (visualization)
115
hg19
47
GRCh38
2
hg18
files.file_type!
tsv
organ_slims!
limb
month_released!
June, 2020
BIOSAMPLE
TYPE
123 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
caQTL
tissue
liver
13
10
3
9
2
1
7
1
right lobe of liver
2
1
1
primary cell
hepatocyte
1
3
7
1
4
1
4
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
1
1
2
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
1
2
5
3
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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