Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
830
candidate regulatory elements
460
target gene predictions
449
chromatin state
173
accessible chromatin
87
histone modifications
86
eQTL
36
variant allelic effects
35
binding sites
3
pQTL
2
Fine-mapped variants
2
gene expression
2
sQTL
2
variant to gene
1
caQTL
1
other
Date released
1218
September, 2022
550
February, 2021
58
June, 2020
52
January, 2022
46
May, 2020
37
August, 2021
35
January, 2020
28
March, 2020
28
May, 2021
24
February, 2023
21
February, 2024
19
August, 2017
17
November, 2022
8
April, 2019
6
May, 2019
6
November, 2019
4
March, 2023
3
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
February, 2020
Available data
1645
bed bed3+
424
bed bed9
tsv
100
bigWig
22
bigBed bed9
1
bam
Organism
2168
Homo sapiens
Biosample type
2313
cell line
2169
tissue
1755
primary cell
393
in vitro differentiated cells
4
stem cell
Organ
292
musculature of body
291
kidney
283
brain
229
intestine
limb
187
heart
180
lung
132
large intestine
106
stomach
98
extraembryonic component
97
pancreas
80
small intestine
69
connective tissue
68
eye
66
blood vessel
vasculature
64
ureter
62
adipose tissue
61
adrenal gland
60
placenta
59
epithelium
51
liver
48
thymus
37
gonad
35
embryo
33
esophagus
33
spleen
32
artery
31
spinal cord
23
skin of body
20
ovary
19
nerve
19
thyroid gland
18
bone element
18
skeleton
17
lymphoid tissue
17
testis
14
prostate gland
12
breast
11
uterus
10
mouth
9
tongue
9
urinary bladder
9
vagina
3
bodily fluid
2
blood
2
mammary gland
2
penis
2
pituitary gland
Project
2164
AMP
5
ITG
Genome assembly (visualization)
2096
hg19
551
GRCh38
3
hg18
files.file_type!
tsv
organ_slims!
limb
vasculature
BIOSAMPLE
TYPE
2169 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
variant allelic effects
binding sites
pQTL
Fine-mapped variants
gene expression
sQTL
variant to gene
caQTL
other
tissue
heart
37
20
21
5
1
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
10
2
1
1
1
brain
29
16
18
2
3
2
1
1
lung
33
17
16
1
+ See 203 more…
See all biosamples
Download