Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
85
candidate regulatory elements
81
target gene predictions
50
chromatin state
31
binding sites
25
histone modifications
18
eQTL
16
variant allelic effects
8
gene expression
2
caQTL
2
pQTL
Date released
126
September, 2022
90
February, 2021
50
November, 2021
21
June, 2020
16
February, 2024
14
May, 2021
12
October, 2022
10
August, 2021
10
May, 2020
9
January, 2020
7
August, 2017
7
January, 2022
7
November, 2022
5
February, 2020
3
April, 2020
3
March, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
June, 2021
Available data
339
bed bed3+
tsv
55
bigWig
43
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
407
Homo sapiens
Biosample type
246
primary cell
81
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
348
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
390
hg19
117
GRCh38
2
hg18
files.file_type!
tsv
BIOSAMPLE
TYPE
407 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
gene expression
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 36 more…
tissue
adipose tissue
2
7
8
6
1
4
1
omental fat pad
2
5
2
2
1
breast epithelium
1
5
3
2
subcutaneous adipose tissue
2
2
1
5
1
subcutaneous abdominal adipose tissue
5
1
+ See 7 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download