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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
300
accessible chromatin
200
target gene predictions
180
candidate regulatory elements
101
chromatin state
74
binding sites
57
variant allelic effects
53
histone modifications
27
gene expression
20
eQTL
4
caQTL
2
differential activity
2
pQTL
Date released
271
September, 2022
198
February, 2021
177
November, 2021
77
February, 2024
45
June, 2020
30
May, 2021
25
May, 2020
23
January, 2020
22
January, 2021
22
November, 2022
21
August, 2021
18
October, 2022
14
February, 2020
12
February, 2023
10
April, 2020
10
August, 2017
9
March, 2020
7
August, 2018
7
October, 2019
6
January, 2022
5
May, 2022
2
March, 2023
2
November, 2020
2
September, 2018
2
September, 2023
1
June, 2021
1
November, 2019
Available data
877
bed bed3+
tsv
231
bigWig
91
bed bed9
85
txt
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1020
Homo sapiens
Biosample type
760
primary cell
128
tissue
66
in vitro differentiated cells
65
cell line
1
stem cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
805
AMP
177
ENCODE
22
T1D
10
LungMap
4
ITG
2
community
Genome assembly (visualization)
979
hg19
339
GRCh38
2
hg18
files.file_type!
tsv
BIOSAMPLE
TYPE
1020 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
pQTL
primary cell
endothelial cell
15
7
2
2
1
1
1
2
fibroblast
16
4
1
6
2
hepatocyte
8
3
1
1
1
2
4
4
pericyte cell
10
10
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 135 more…
tissue
adipose tissue
2
8
7
6
1
1
4
pigmented layer of retina
20
omental fat pad
2
2
5
2
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 23 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
1
2
1
+ See 12 more…
cell line
EndoC_BH1
8
1
1
2
GM23248
1
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
keratinocyte
3
1
+ See 18 more…
stem cell
mesenchymal stem cell
1
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