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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
200
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
51
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
19
gene expression
3
eQTL
2
caQTL
2
differential activity
Date released
151
September, 2022
127
November, 2021
111
February, 2021
61
February, 2024
25
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
January, 2020
11
August, 2021
11
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
November, 2019
Available data
535
bed bed3+
tsv
164
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
csv
3
bam
3
bed gappedPeak
3
xls
Organism
611
Homo sapiens
Biosample type
501
primary cell
59
tissue
33
cell line
18
in vitro differentiated cells
Organ
611
epithelium
387
kidney
386
connective tissue
380
brain
356
musculature of body
310
lung
286
intestine
221
limb
217
bodily fluid
216
heart
206
blood
205
embryo
202
skin of body
198
pancreas
188
vasculature
172
large intestine
148
blood vessel
146
extraembryonic component
126
liver
117
stomach
105
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
64
adipose tissue
64
penis
62
lymph node
61
ureter
57
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
20
vein
18
mouth
18
nerve
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
455
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
586
hg19
211
GRCh38
files.file_type!
tsv
csv
month_released!
January, 2020
BIOSAMPLE
TYPE
611 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
7
3
1
1
1
2
4
4
foreskin keratinocyte
4
11
4
endothelial cell of umbilical vein
2
4
6
3
2
1
keratinocyte
2
5
3
3
1
1
2
+ See 94 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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