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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
214
accessible chromatin
129
target gene predictions
108
candidate regulatory elements
57
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
19
gene expression
4
eQTL
2
caQTL
2
differential activity
Date released
163
September, 2022
129
November, 2021
115
February, 2021
61
February, 2024
26
June, 2020
20
January, 2021
18
May, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
August, 2021
11
February, 2023
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
January, 2022
1
November, 2019
Available data
564
bed bed3+
tsv
177
bigWig
78
txt
54
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
647
Homo sapiens
Biosample type
516
primary cell
79
tissue
34
cell line
18
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
489
AMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
621
hg19
232
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
647 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
3
1
1
1
2
4
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 95 more…
tissue
ovary
1
6
8
4
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
+ See 14 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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