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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
accessible chromatin
142
target gene predictions
124
candidate regulatory elements
70
chromatin state
46
binding sites
45
variant allelic effects
31
histone modifications
22
gene expression
17
eQTL
2
Fine-mapped variants
2
caQTL
2
differential activity
2
sQTL
Date released
191
September, 2022
128
February, 2021
128
November, 2021
65
February, 2024
28
June, 2020
23
May, 2021
22
January, 2021
20
May, 2020
19
August, 2021
17
January, 2020
15
November, 2022
11
February, 2023
9
February, 2020
9
March, 2020
7
April, 2020
7
August, 2018
6
August, 2017
6
March, 2023
6
October, 2019
6
October, 2022
4
January, 2022
2
May, 2022
2
November, 2019
1
April, 2019
1
June, 2021
Available data
623
bed bed3+
tsv
188
bigWig
78
txt
63
bed bed9
15
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
733
Homo sapiens
Biosample type
521
primary cell
149
tissue
45
cell line
18
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
574
AMP
128
ENCODE
22
T1D
7
LungMap
2
community
Genome assembly (visualization)
697
hg19
252
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
733 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
Fine-mapped variants
caQTL
differential activity
sQTL
primary cell
endothelial cell
15
7
2
2
1
1
1
2
hepatocyte
8
3
1
1
1
2
4
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 97 more…
tissue
islet of Langerhans
6
1
3
2
1
1
2
13
2
2
pancreas
5
5
5
3
1
1
1
1
pigmented layer of retina
20
body of pancreas
5
8
4
1
endocrine pancreas
4
7
4
+ See 18 more…
cell line
EndoC_BH1
8
1
1
2
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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