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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
84
target gene predictions
53
candidate regulatory elements
25
chromatin state
15
binding sites
13
accessible chromatin
10
histone modifications
5
eQTL
1
variant allelic effects
Date released
75
September, 2022
52
February, 2024
51
February, 2021
11
June, 2020
5
January, 2022
5
May, 2021
4
November, 2021
2
October, 2022
1
March, 2020
Available data
176
bed bed3+
25
bed bed9
tsv
2
bigWig
Organism
206
Homo sapiens
Biosample type
125
cell line
62
tissue
19
primary cell
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
202
AMP
4
ENCODE
Genome assembly (visualization)
201
hg19
85
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
206 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
variant allelic effects
cell line
HeLa-S3
55
5
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
2
1
1
1
1
RWPE1
1
2
1
1
1
1
+ See 9 more…
tissue
ovary
6
8
4
1
1
testis
3
7
3
1
1
1
1
prostate gland
2
4
2
2
1
2
1
uterus
2
3
1
1
1
endometrium cancer
1
1
+ See 1 more…
primary cell
epithelial cell of prostate
3
4
2
Ishikawa
1
1
1
luteal cell
1
1
uterine smooth muscle cell
1
1
Leydig cell
1
+ See 2 more…
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