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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
350
accessible chromatin
4
variant allelic effects
3
target gene predictions
Date released
222
November, 2021
28
January, 2021
21
January, 2020
19
April, 2020
16
February, 2024
13
August, 2021
13
May, 2021
7
May, 2022
5
October, 2019
4
February, 2021
3
September, 2022
2
May, 2020
2
November, 2020
1
January, 2022
1
June, 2021
Available data
1550
bed bed3+
tsv
366
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
357
Homo sapiens
Biosample type
357
primary cell
120
tissue
12
in vitro differentiated cells
4
cell line
Organ
142
epithelium
46
connective tissue
40
pancreas
18
kidney
18
vasculature
12
musculature of body
11
intestine
11
liver
10
blood vessel
9
lung
8
brain
6
adrenal gland
6
heart
5
eye
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
2
artery
2
bone element
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
gonad
1
ovary
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
222
ENCODE
88
AMP
28
T1D
19
LungMap
Genome assembly (visualization)
357
hg19
271
GRCh38
files.file_type!
tsv
BIOSAMPLE
TYPE
357 results
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table-tab-icon
Clear Filters
accessible chromatin
variant allelic effects
target gene predictions
primary cell
fibroblast
14
monocyte
14
endothelial cell
13
excitatory neuron
12
macrophage
11
pericyte cell
10
pancreatic beta cell
7
1
1
astrocyte
8
pancreatic alpha cell
6
1
1
hepatocyte
7
smooth muscle cell
7
pancreatic acinar cell
6
pancreatic delta cell
4
1
1
T cell
5
erythroblast
5
inhibitory neuron
5
pancreatic ductal cell
5
B cell
4
skeletal muscle satellite cell
4
type II pneumocyte
4
cardiac fibroblast
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
osteoblast
3
pancreatic polypeptide-secreting cell
2
1
skeletal muscle fiber
3
type I pneumocyte
3
CD8-positive, alpha-beta T cell
2
Muller cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
ciliated cell
2
club cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
glutamatergic neuron
2
hepatic stellate cell
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
megakaryocyte
2
memory B cell
2
mesangial cell
2
mesothelial cell
2
natural killer cell
2
oligodendrocyte precursor cell
2
pancreatic stellate cell
2
retinal pigment epithelial cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
type I muscle cell
2
type II muscle cell
2
CD4-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
alveolar macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
endothelial cell of artery
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
intestinal tuft cell
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
leukocyte
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
mesenchymal stem cell
1
metanephros
1
microglial cell
1
myoepithelial cell
1
myofibroblast cell
1
naive B cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuroendocrine cell
1
neuron
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
plasma cell
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
regular atrial cardiac myocyte
1
regulatory T cell
1
renal cortical epithelial cell
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
skeletal muscle myoblast
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thyroid follicular cell
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
See all biosamples
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