Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
372
target gene predictions
370
gene expression
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
372
February, 2021
333
November, 2021
281
September, 2023
256
May, 2021
96
February, 2024
63
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
40
May, 2022
37
January, 2022
30
October, 2022
23
January, 2020
19
April, 2020
17
August, 2021
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1519
bed bed3+
589
tsv
406
bigWig
164
bed bed9
txt
27
bed bed9+
12
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2235
Homo sapiens
Biosample type
2604
tissue
2348
cell line
2280
primary cell
464
in vitro differentiated cells
4
stem cell
Organ
702
epithelium
263
connective tissue
216
kidney
158
vasculature
119
pancreas
111
blood vessel
99
skin of body
59
liver
47
musculature of body
45
mammary gland
41
penis
40
extraembryonic component
33
lung
31
heart
29
artery
28
brain
22
embryo
22
eye
20
intestine
19
vein
17
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1588
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1727
hg19
707
GRCh38
files.file_type!
txt
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
2280 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
2
7
30
1
B cell
6
10
2
14
8
endothelial cell
15
7
6
1
2
1
2
+ See 416 more…
See all biosamples
Download