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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
159
candidate regulatory elements
77
chromatin state
75
target gene predictions
50
accessible chromatin
16
variant allelic effects
7
binding sites
7
gene expression
6
histone modifications
4
eQTL
Date released
225
September, 2022
95
February, 2021
19
May, 2020
16
August, 2021
15
June, 2020
14
January, 2020
8
February, 2020
3
November, 2021
2
October, 2022
1
April, 2019
1
February, 2024
1
January, 2022
1
May, 2019
Available data
309
bed bed3+
tsv
txt
77
bed bed9
36
bigWig
2
bigBed bed9
Organism
401
Homo sapiens
Biosample type
291
tissue
71
primary cell
38
cell line
1
in vitro differentiated cells
Organ
625
epithelium
401
kidney
399
brain
395
connective tissue
361
musculature of body
310
lung
286
intestine
227
limb
226
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
202
vasculature
201
pancreas
172
large intestine
157
blood vessel
146
extraembryonic component
128
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
67
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
19
nerve
18
mouth
18
skeleton
16
bronchus
16
lymphatic vessel
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
398
AMP
3
ENCODE
Genome assembly (visualization)
387
hg19
105
GRCh38
files.file_type!
txt
tsv
BIOSAMPLE
TYPE
401 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
accessible chromatin
variant allelic effects
binding sites
gene expression
histone modifications
eQTL
tissue
kidney
29
16
14
10
1
1
2
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 12 more…
primary cell
kidney tubule cell
3
2
2
2
1
epithelial cell of proximal tubule
2
1
1
1
1
1
1
glomerular endothelial cell
2
1
1
2
1
1
kidney glomerular epithelial cell
2
1
1
2
1
1
renal cortical epithelial cell
2
1
1
2
1
1
+ See 13 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
G401
2
1
1
+ See 4 more…
in vitro differentiated cells
renal cell carcinoma
1
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