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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1355
target gene predictions
902
accessible chromatin
834
candidate regulatory elements
481
gene expression
167
differential activity
166
eQTL
139
variant allelic effects
137
histone modifications
99
binding sites
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Date released
February, 2021
1678
September, 2022
384
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
March, 2020
106
January, 2022
103
August, 2021
101
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3514
bed bed3+
bed bed9
720
tsv
532
bigWig
40
bigBed bed9
34
bed bed9+
txt
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4417
Homo sapiens
Biosample type
1824
primary cell
1525
tissue
869
cell line
241
in vitro differentiated cells
4
stem cell
Organ
691
epithelium
375
kidney
307
connective tissue
290
brain
233
pancreas
212
musculature of body
185
vasculature
171
lung
163
intestine
161
heart
141
blood vessel
136
limb
135
embryo
119
bodily fluid
116
liver
114
blood
102
skin of body
95
large intestine
83
eye
80
extraembryonic component
69
uterus
67
stomach
58
adipose tissue
52
artery
47
small intestine
45
adrenal gland
45
mammary gland
39
bone element
39
placenta
36
prostate gland
33
ureter
30
gonad
28
esophagus
27
lymph node
27
thymus
26
penis
26
spinal cord
18
nerve
18
spleen
15
ovary
15
thyroid gland
14
lymphatic vessel
14
lymphoid tissue
14
testis
12
pituitary gland
12
vein
11
mouth
9
bronchus
8
breast
7
bone marrow
7
urinary bladder
6
skeleton
6
tongue
6
vagina
3
nose
1
pericardium
1
trachea
Project
3758
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
3683
hg19
996
GRCh38
4
hg18
files.file_type!
txt
bed bed9
month_released!
February, 2021
BIOSAMPLE
TYPE
4465 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
primary cell
monocyte
2
18
15
4
84
2
1
1
CD8-positive, alpha-beta T cell
5
4
2
30
1
endothelial cell
7
15
2
1
2
2
fibroblast
4
16
2
6
1
B cell
10
6
9
2
+ See 367 more…
tissue
heart
20
5
19
2
2
stomach
21
3
19
1
1
kidney
14
10
14
1
1
brain
16
2
16
1
2
1
islet of Langerhans
1
6
5
12
1
1
3
2
2
2
+ See 190 more…
cell line
HeLa-S3
55
3
1
H1-hESC
39
1
1
8
1
A549
19
1
18
1
K562
23
1
6
1
1
EndoC_BH1
1
8
8
3
1
+ See 268 more…
in vitro differentiated cells
neural progenitor cell
5
10
4
7
14
hematopoietic multipotent progenitor cell
10
1
10
1
adipocyte
6
4
2
4
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
+ See 67 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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