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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
219
accessible chromatin
196
target gene predictions
176
gene expression
123
chromatin state
92
differential activity
52
binding sites
41
variant allelic effects
32
histone modifications
4
eQTL
2
caQTL
Date released
358
September, 2022
198
February, 2021
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
31
June, 2020
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
August, 2021
10
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
770
bed bed3+
325
tsv
177
bigWig
119
bed bed9
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1165
Homo sapiens
Biosample type
758
primary cell
242
tissue
139
cell line
26
in vitro differentiated cells
Organ
871
epithelium
565
kidney
466
brain
453
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
264
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
853
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
892
hg19
304
GRCh38
files.file_type!
txt
BIOSAMPLE
TYPE
1165 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
15
7
6
2
2
1
1
2
hepatocyte
1
8
3
13
1
1
2
4
endothelial cell of umbilical vein
6
2
4
5
2
1
foreskin keratinocyte
11
4
4
pancreatic ductal cell
6
3
3
3
1
1
2
+ See 135 more…
tissue
lung
33
17
1
16
1
left lung
26
13
13
right lung
22
1
11
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
3
1
1
+ See 19 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
WI38
5
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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