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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
518
target gene predictions
509
chromatin state
115
eQTL
110
gene expression
89
histone modifications
79
accessible chromatin
74
Fine-mapped variants
48
variant allelic effects
36
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1376
September, 2022
633
February, 2021
104
March, 2020
63
June, 2020
56
January, 2022
53
May, 2020
48
February, 2020
39
August, 2021
31
May, 2021
28
March, 2024
22
January, 2020
19
August, 2017
13
February, 2024
8
April, 2019
8
November, 2022
7
February, 2023
7
May, 2019
6
March, 2023
3
October, 2019
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
November, 2019
Available data
1850
bed bed3+
486
bed bed9
212
tsv
bigWig
31
bigBed bed9
1
bam
Organism
2530
Homo sapiens
Biosample type
2532
tissue
2348
cell line
2056
primary cell
458
in vitro differentiated cells
4
stem cell
Organ
337
brain
302
musculature of body
284
kidney
232
intestine
222
limb
199
heart
181
lung
134
large intestine
108
stomach
98
extraembryonic component
98
pancreas
88
connective tissue
80
small intestine
79
adipose tissue
76
blood vessel
76
vasculature
62
adrenal gland
61
ureter
60
placenta
56
liver
48
thymus
41
eye
40
epithelium
39
gonad
36
artery
36
spinal cord
35
embryo
35
esophagus
33
spleen
25
skin of body
23
nerve
21
ovary
20
thyroid gland
18
lymphoid tissue
18
testis
15
prostate gland
14
bone element
13
breast
13
uterus
11
mouth
10
skeleton
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2527
AMP
5
ITG
Genome assembly (visualization)
2338
hg19
643
GRCh38
3
hg18
files.file_type!
xls
bigWig
BIOSAMPLE
TYPE
2532 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
histone modifications
accessible chromatin
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
3
1
2
2
1
stomach
40
21
19
1
1
1
3
brain
29
16
18
2
1
3
1
1
1
kidney
29
14
15
1
7
2
1
1
1
lung
33
17
16
1
1
muscle of arm
33
16
16
1
small intestine
29
17
15
1
1
adrenal gland
28
17
14
1
1
1
placenta
26
15
14
1
2
1
1
muscle of leg
27
14
15
1
large intestine
27
14
13
1
1
muscle of back
28
13
13
left lung
26
13
13
thymus
20
14
11
1
1
1
liver
13
10
9
7
1
2
2
1
1
1
right lung
22
11
11
1
right kidney
20
10
10
1
islet of Langerhans
1
3
13
11
1
2
2
1
2
2
2
renal cortex interstitium
20
9
9
1
renal pelvis
19
9
9
1
1
left kidney
18
9
9
spleen
15
8
6
1
1
1
1
adipose tissue
7
8
6
4
3
1
1
1
heart left ventricle
11
7
8
1
1
1
2
spinal cord
14
8
7
1
1
body of pancreas
8
5
4
1
2
3
1
retina
6
3
3
1
1
1
7
1
1
sigmoid colon
10
7
5
1
tibial nerve
6
3
4
2
2
1
3
2
caudate nucleus
5
3
4
2
1
1
1
3
1
ovary
8
6
4
1
1
1
psoas muscle
7
8
4
1
pancreas
5
5
3
1
1
2
1
1
subcutaneous adipose tissue
2
1
6
5
3
1
1
thyroid gland
8
5
4
1
1
transverse colon
8
5
4
1
1
gastrocnemius medialis
8
5
4
1
heart right ventricle
6
5
5
1
1
substantia nigra
5
2
3
3
1
1
3
testis
7
3
3
1
1
1
1
1
coronary artery
3
3
2
2
1
3
2
1
muscle of trunk
8
5
4
right atrium auricular region
3
2
2
2
2
1
3
2
tibial artery
3
2
3
2
1
1
3
2
chorionic villus
8
4
4
layer of hippocampus
6
3
4
1
1
1
omental fat pad
5
2
2
2
2
3
skeletal muscle tissue
6
3
3
2
1
1
upper lobe of left lung
7
3
3
1
1
1
ascending aorta
4
2
3
1
1
3
1
cerebellum
3
2
2
2
2
1
3
endocrine pancreas
7
4
4
frontal cortex
2
2
2
2
2
1
3
1
Peyer's patch
7
3
3
1
prostate gland
4
2
2
1
2
1
2
putamen
2
1
1
3
1
1
1
3
1
temporal lobe
5
2
5
1
1
aorta
4
4
4
1
Ammon's horn
2
2
1
1
1
1
3
breast epithelium
5
3
2
1
esophagus muscularis mucosa
5
2
2
1
1
esophagus squamous epithelium
6
2
2
1
left cardiac atrium
2
1
6
1
1
left renal cortex interstitium
6
2
2
1
left renal pelvis
6
2
2
1
right renal pelvis
6
2
2
1
trophoblast
4
3
2
1
1
angular gyrus
4
2
4
chorion membrane
3
3
3
1
colonic mucosa
4
2
3
1
esophagus
4
3
2
1
lower leg skin
6
2
2
right renal cortex interstitium
5
2
2
1
thoracic aorta
4
2
3
1
vagina
4
2
2
1
1
cingulate gyrus
4
2
3
duodenal mucosa
4
2
3
eye
4
2
2
1
mucosa of rectum
4
2
3
parathyroid adenoma
5
2
2
right lobe of liver
2
1
1
1
1
3
stomach smooth muscle
4
2
3
tongue
4
2
2
1
uterus
3
2
1
1
1
1
limb
3
2
2
1
muscle layer of colon
4
2
2
muscle layer of duodenum
4
2
2
right cardiac atrium
2
2
3
1
urinary bladder
3
2
2
1
amygdala
2
1
1
3
gastroesophageal sphincter
5
1
1
globus pallidus
2
1
1
1
1
1
hypothalamus
2
1
1
3
midbrain
1
1
1
1
1
1
1
nucleus accumbens
2
1
1
3
occipital lobe
1
1
1
1
1
1
1
pigmented layer of retina
7
Brodmann (1909) area 46
2
2
2
anterior cingulate cortex
2
1
3
cerebellum (Hemisphere)
1
1
3
1
skin of body
1
1
1
3
subcutaneous abdominal adipose tissue
5
1
superior temporal gyrus
1
1
1
1
1
1
umbilical cord
2
1
1
1
1
C1 segment of cervical spinal cord
1
1
3
cartilage tissue
2
1
2
gastrocnemius medialis(Muscle - Skeletal)
1
1
3
germinal matrix
2
1
2
left ventricle myocardium
1
1
3
medulla oblongata
1
1
1
1
1
middle frontal gyrus
2
1
1
1
pons
1
1
1
1
1
amnion
2
1
1
bone tissue
4
cerebellar cortex
2
1
1
cortex of kidney
1
1
1
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
3
embryonic facial prominence
1
1
1
1
femur
2
1
1
inferior parietal cortex
1
1
1
1
mucosa of stomach
2
1
1
rectum smooth muscle tissue
1
1
2
visceral abdominal adipose tissue
1
2
1
arm bone
1
1
1
dorsolateral prefrontal cortex
1
1
1
germinal center
1
1
1
leg bone
1
1
1
prefrontal cortex
1
1
1
suprapubic skin
3
muscle of leg
2
blood
2
breast carcinoma
1
1
chorion
2
endometrium cancer
1
1
fallopian tube
1
1
first pancreatic bud
1
1
kidney epithelium
1
1
mammary gland
1
1
middle frontal area 46
2
minor salivary gland
1
1
pituitary gland
1
1
placental basal plate
2
respiratory system smooth muscle
1
1
skeletal muscle
1
1
skin of forearm
1
1
skin of prepuce of penis
1
1
tissue
2
hindlimb muscle
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
forelimb muscle
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
metanephros
1
mid-frontal lobe
1
mitral valve
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus of ventral thalamus
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
parietal lobe
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
prostate
1
pulmonary valve
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
renal glomerulus
1
right arm bone
1
septal nuclear complex
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
synovial joint
1
temporal pole
1
thalamic complex
1
thyroid
1
tricuspid valve
1
white adipose tissue
1
white matter
1
whole blood
1
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