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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
78
candidate regulatory elements
77
target gene predictions
49
gene expression
47
chromatin state
33
accessible chromatin
31
binding sites
25
histone modifications
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
117
September, 2022
107
February, 2021
20
June, 2020
18
November, 2021
17
September, 2023
16
February, 2024
16
May, 2021
12
October, 2022
11
August, 2021
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
2
May, 2022
2
May, 2024
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
November, 2020
1
October, 2019
Available data
327
bed bed3+
65
tsv
bigWig
40
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
401
Homo sapiens
Biosample type
233
primary cell
88
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
770
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
218
bodily fluid
217
pancreas
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
133
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
361
AMP
18
ENCODE
15
KPMP
4
ITG
2
community
1
T1D
Genome assembly (visualization)
328
hg19
75
GRCh38
2
hg18
files.file_type!
xls
bigWig
organ_slims!
bone marrow
BIOSAMPLE
TYPE
401 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
4
2
1
2
6
osteoblast
2
2
2
1
2
3
2
fibroblast of dermis
4
4
3
1
+ See 42 more…
tissue
adipose tissue
7
8
3
6
1
1
4
1
subcutaneous adipose tissue
2
5
1
6
1
1
3
omental fat pad
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 5 more…
in vitro differentiated cells
adipocyte
4
6
1
6
3
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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