Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
156
accessible chromatin
114
target gene predictions
86
candidate regulatory elements
36
variant allelic effects
30
binding sites
17
histone modifications
3
chromatin state
2
caQTL
1
eQTL
Date released
127
November, 2021
91
September, 2022
79
February, 2021
48
February, 2024
20
January, 2021
14
June, 2020
11
August, 2021
11
January, 2020
10
May, 2020
9
May, 2021
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
May, 2022
1
February, 2023
1
March, 2020
Available data
445
bed bed3+
305
tsv
151
bigWig
78
txt
44
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
445
Homo sapiens
Biosample type
445
primary cell
54
tissue
31
cell line
17
in vitro differentiated cells
Organ
445
epithelium
208
connective tissue
104
vasculature
83
skin of body
71
blood vessel
70
pancreas
52
kidney
41
musculature of body
39
mammary gland
38
liver
35
penis
32
extraembryonic component
31
brain
30
lung
24
heart
23
intestine
20
artery
20
eye
18
embryo
15
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
291
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
444
hg19
165
GRCh38
BIOSAMPLE
TYPE
445 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
variant allelic effects
binding sites
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
2
2
1
2
1
hepatocyte
8
3
1
2
1
4
endothelial cell of umbilical vein
2
4
6
2
1
foreskin keratinocyte
4
11
keratinocyte
2
5
3
1
1
2
1
endothelial cell of hepatic sinusoid
6
6
pancreatic beta cell
8
3
1
pancreatic ductal cell
5
3
1
1
2
pancreatic alpha cell
7
3
1
bronchial epithelial cell
1
2
4
2
1
mammary epithelial cell
1
1
3
4
1
mammary gland epithelial cell
1
4
3
1
1
pancreatic delta cell
5
4
1
pancreatic acinar cell
5
3
1
retinal pigment epithelial cell
3
1
2
2
1
dermis blood vessel endothelial cell
2
6
epithelial cell of prostate
3
4
kidney tubule cell
2
2
3
type II pneumocyte
4
2
1
choroid plexus epithelial cell
1
1
2
1
1
colon epithelial cell
3
3
cortical cell of adrenal gland
3
2
1
enterocyte
3
3
epithelial cell of proximal tubule
1
1
2
1
1
luminal epithelial cell of mammary gland
2
3
1
myoepithelial cell of mammary gland
2
4
pulmonary artery endothelial cell
1
1
2
1
1
renal cortical epithelial cell
2
1
2
1
epithelial cell of esophagus
1
2
2
glomerular endothelial cell
1
1
2
1
glomerular visceral epithelial cell
2
1
2
kidney epithelial cell
1
1
2
1
kidney glomerular epithelial cell
2
1
2
tracheal epithelial cell
1
2
2
aortic endothelial cell
2
1
1
brain microvascular endothelial cell
1
1
2
dermis lymphatic vessel endothelial cell
2
2
endothelial cell of lymphatic vessel
3
1
iris pigment epithelial cell
1
1
2
lung microvascular endothelial cell
1
3
mesothelial cell
2
1
1
non-pigmented ciliary epithelial cell
1
1
2
pancreatic polypeptide-secreting cell
2
1
1
type I pneumocyte
3
1
club cell
2
1
endocardial cell
2
1
goblet cell
1
2
kidney capillary endothelial cell
1
1
1
pancreatic A cell
3
parietal cell
1
1
1
peptic cell
1
1
1
thyroid follicular cell
1
1
1
type B pancreatic cell
3
basal cell of epidermis
1
1
capillary endothelial cell
2
cardiac endothelial cell
1
1
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
1
1
enterochromaffin-like cell
1
1
enterocyte of epithelium of small intestine
1
1
epidermal melanocyte
1
1
epithelial cell of amnion
1
1
foveolar cell of stomach
1
1
granular cell of epidermis
1
1
meso-epithelial cell
1
1
myoepithelial cell
1
1
non keratinizing barrier epithelial cell
1
1
paneth cell
1
1
respiratory goblet cell
1
1
small intestine goblet cell
1
1
stomach neuroendocrine cell
1
1
type I cell of adrenal cortex
1
1
type II cell of adrenal cortex
1
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
bronchial goblet cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
endothelial cell of coronary artery
1
enteroendocrine cell
1
gastric goblet cell
1
granulosa cell
1
intestinal epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
neuroendocrine cell
1
pancreatic endothelial cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
1
See all biosamples
Download