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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1619
candidate regulatory elements
1319
target gene predictions
histone modifications
875
accessible chromatin
801
binding sites
121
variant allelic effects
38
chromatin state
12
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1612
September, 2022
1539
February, 2021
326
November, 2021
281
June, 2020
277
February, 2024
167
May, 2021
133
May, 2020
99
October, 2022
64
January, 2020
56
January, 2021
42
March, 2020
41
November, 2022
35
August, 2021
32
August, 2017
31
February, 2023
19
April, 2020
13
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
2
November, 2020
2
September, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4807
bed bed3+
872
tsv
839
bed bed9
521
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
4761
Homo sapiens
Biosample type
1685
tissue
1521
cell line
1344
primary cell
251
in vitro differentiated cells
4
stem cell
Organ
519
epithelium
305
connective tissue
303
kidney
274
musculature of body
261
brain
235
lung
220
intestine
173
limb
167
embryo
167
heart
165
bodily fluid
157
blood
155
vasculature
153
pancreas
152
skin of body
132
large intestine
117
blood vessel
107
extraembryonic component
94
eye
92
stomach
liver
74
uterus
68
mammary gland
64
bone element
64
small intestine
57
adrenal gland
56
prostate gland
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
41
artery
37
thymus
36
gonad
33
esophagus
29
spinal cord
26
spleen
18
testis
17
lymphoid tissue
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
nerve
13
bronchus
13
lymphatic vessel
13
mouth
10
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
4401
AMP
326
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4800
hg19
668
GRCh38
annotation_type!
histone modifications
organ_slims!
placenta
liver
BIOSAMPLE
TYPE
4807 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
2
stomach
40
21
3
kidney
29
14
10
1
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 170 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
HFFc6
19
+ See 634 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
2
2
2
1
CD14-positive monocyte
8
19
fibroblast
4
16
1
6
+ See 300 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
1
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
5
1
+ See 78 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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