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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
10
accessible chromatin
6
binding sites
histone modifications
3
chromatin state
Date released
65
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
132
Homo sapiens
Biosample type
99
tissue
27
cell line
6
primary cell
Organ
519
epithelium
305
connective tissue
303
kidney
274
musculature of body
261
brain
235
lung
220
intestine
173
limb
167
embryo
167
heart
165
bodily fluid
157
blood
155
vasculature
153
pancreas
152
skin of body
132
large intestine
117
blood vessel
107
extraembryonic component
94
eye
92
stomach
87
liver
74
uterus
68
mammary gland
64
bone element
64
small intestine
57
adrenal gland
prostate gland
53
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
41
artery
37
thymus
36
gonad
33
esophagus
29
spinal cord
26
spleen
18
testis
17
lymphoid tissue
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
nerve
13
bronchus
13
lymphatic vessel
13
mouth
10
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
126
AMP
6
ENCODE
Genome assembly (visualization)
132
hg19
8
GRCh38
annotation_type!
histone modifications
organ_slims!
prostate gland
BIOSAMPLE
TYPE
132 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
chromatin state
tissue
large intestine
27
14
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
1
+ See 4 more…
cell line
HT-29
2
2
1
1
HCT116
2
3
SW480
2
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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