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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1650
candidate regulatory elements
1346
target gene predictions
histone modifications
898
accessible chromatin
816
binding sites
122
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1654
September, 2022
1556
February, 2021
333
November, 2021
293
February, 2024
286
June, 2020
170
May, 2021
133
May, 2020
101
October, 2022
65
January, 2020
56
January, 2021
44
March, 2020
41
November, 2022
36
August, 2021
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4907
bed bed3+
893
tsv
859
bed bed9
543
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4861
Homo sapiens
Biosample type
1721
tissue
1541
cell line
1385
primary cell
254
in vitro differentiated cells
4
stem cell
Organ
519
epithelium
305
connective tissue
303
kidney
274
musculature of body
261
brain
235
lung
220
intestine
173
limb
167
embryo
167
heart
165
bodily fluid
157
blood
155
vasculature
153
pancreas
152
skin of body
132
large intestine
117
blood vessel
107
extraembryonic component
94
eye
92
stomach
87
liver
74
uterus
68
mammary gland
64
bone element
64
small intestine
57
adrenal gland
56
prostate gland
53
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
41
artery
37
thymus
36
gonad
33
esophagus
29
spinal cord
spleen
18
testis
17
lymphoid tissue
17
ovary
17
thyroid gland
16
vein
15
skeleton
nerve
13
bronchus
13
lymphatic vessel
13
mouth
10
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
4494
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4899
hg19
692
GRCh38
1
hg18
annotation_type!
histone modifications
organ_slims!
spleen
nerve
BIOSAMPLE
TYPE
4907 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
5
1
2
stomach
40
21
3
kidney
29
14
10
1
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 171 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
HFFc6
19
+ See 639 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
15
2
2
2
1
CD14-positive monocyte
8
19
fibroblast
4
16
1
6
+ See 307 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
10
adipocyte
4
6
4
1
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
5
1
+ See 79 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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