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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
target gene predictions
976
histone modifications
903
accessible chromatin
817
binding sites
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
sQTL
Date released
2406
February, 2021
844
September, 2022
288
June, 2020
222
November, 2021
146
May, 2021
98
October, 2022
65
January, 2020
63
February, 2024
54
May, 2020
51
August, 2021
41
November, 2022
34
August, 2017
30
February, 2023
28
January, 2021
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
March, 2020
Available data
4441
bed bed3+
900
tsv
869
bed bed9
539
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
9
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4396
Homo sapiens
Biosample type
1722
cell line
1294
tissue
1147
primary cell
276
in vitro differentiated cells
1
stem cell
Organ
387
epithelium
237
connective tissue
223
brain
223
kidney
194
musculature of body
160
lung
152
intestine
133
bodily fluid
126
blood
120
skin of body
119
vasculature
118
limb
114
heart
103
pancreas
94
embryo
93
large intestine
91
blood vessel
87
eye
77
liver
76
extraembryonic component
61
stomach
54
bone element
53
mammary gland
47
prostate gland
45
lymph node
43
penis
41
small intestine
39
placenta
35
adrenal gland
35
ureter
34
artery
33
adipose tissue
26
gonad
24
thymus
21
esophagus
20
spinal cord
18
spleen
18
uterus
15
testis
13
vein
12
lymphoid tissue
12
skeleton
11
lymphatic vessel
10
bronchus
10
ovary
10
thyroid gland
9
mouth
9
nerve
8
bone marrow
6
breast
5
tongue
5
trachea
4
urinary bladder
4
vagina
2
nose
1
pituitary gland
Project
4168
AMP
222
ENCODE
31
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4433
hg19
515
GRCh38
1
hg18
annotation_type!
sQTL
target gene predictions
variant allelic effects
BIOSAMPLE
TYPE
4441 results
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Clear Filters
candidate regulatory elements
histone modifications
accessible chromatin
binding sites
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
A549
21
1
1
2
breast cancer cell
11
9
MCF-7
9
2
1
3
HepG2
2
5
2
3
1
K562
7
1
1
2
1
+ See 749 more…
tissue
heart
37
1
5
1
stomach
40
1
3
kidney
29
2
10
1
1
brain
29
3
2
1
muscle of arm
33
1
+ See 207 more…
primary cell
monocyte
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
30
4
common myeloid progenitor, CD34-positive
27
endothelial cell
1
15
2
2
1
B cell
14
6
+ See 306 more…
in vitro differentiated cells
neural progenitor cell
5
14
10
hematopoietic multipotent progenitor cell
19
1
1
1
adipocyte
4
1
4
1
4
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 91 more…
stem cell
H1-hESC
1
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