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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
target gene predictions
14
histone modifications
13
binding sites
3
variant allelic effects
2
chromatin state
1
caQTL
Date released
22
February, 2021
18
September, 2022
16
February, 2024
5
June, 2020
4
August, 2021
4
November, 2021
2
August, 2017
2
January, 2020
2
May, 2020
2
May, 2022
1
November, 2019
1
October, 2022
1
September, 2018
Available data
80
bed bed3+
28
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
80
Homo sapiens
Biosample type
34
primary cell
24
tissue
20
cell line
2
in vitro differentiated cells
Organ
425
epithelium
252
connective tissue
234
kidney
233
brain
201
musculature of body
161
lung
155
intestine
133
bodily fluid
132
vasculature
126
blood
126
limb
124
heart
121
skin of body
115
pancreas
98
blood vessel
94
embryo
93
large intestine
89
eye
80
liver
76
extraembryonic component
63
stomach
54
bone element
54
mammary gland
48
prostate gland
45
lymph node
43
penis
41
small intestine
39
placenta
38
artery
38
ureter
36
adipose tissue
36
adrenal gland
26
gonad
24
thymus
23
esophagus
20
spinal cord
18
spleen
18
uterus
15
testis
13
vein
12
lymphoid tissue
12
skeleton
11
bronchus
11
lymphatic vessel
11
nerve
11
thyroid gland
10
ovary
9
mouth
8
bone marrow
6
breast
5
tongue
5
trachea
4
urinary bladder
4
vagina
2
nose
1
pituitary gland
Project
76
AMP
4
ENCODE
Genome assembly (visualization)
79
hg19
31
GRCh38
1
hg18
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
80 results
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Clear Filters
accessible chromatin
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
primary cell
hepatocyte
8
1
4
1
2
endothelial cell of hepatic sinusoid
6
6
hepatic stellate cell
3
1
1
Liver fetal (hepatocyte)
1
tissue
liver
4
13
2
1
1
1
right lobe of liver
2
cell line
HepG2
2
2
5
3
1
HuH-7
1
1
1
1
hepatic stellate cell
1
1
HuH-7.5
1
in vitro differentiated cells
hepatocyte
2
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