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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
histone modifications
817
binding sites
633
accessible chromatin
123
variant allelic effects
40
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1672
September, 2022
1569
February, 2021
292
February, 2024
288
June, 2020
171
May, 2021
135
May, 2020
99
October, 2022
66
January, 2020
45
March, 2020
41
November, 2022
36
August, 2021
34
August, 2017
30
February, 2023
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4535
bed bed3+
869
bed bed9
617
tsv
277
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4490
Homo sapiens
Biosample type
1761
tissue
1541
cell line
974
primary cell
254
in vitro differentiated cells
4
stem cell
Organ
365
epithelium
300
kidney
263
musculature of body
261
brain
250
connective tissue
223
lung
201
intestine
173
limb
165
bodily fluid
165
embryo
157
blood
157
heart
146
vasculature
142
skin of body
126
large intestine
115
pancreas
112
blood vessel
104
extraembryonic component
90
eye
83
stomach
82
liver
72
uterus
62
mammary gland
61
bone element
60
small intestine
56
prostate gland
51
placenta
51
ureter
50
lymph node
49
penis
48
adipose tissue
47
adrenal gland
41
artery
36
thymus
34
gonad
29
esophagus
29
spinal cord
26
spleen
18
testis
17
lymphoid tissue
16
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
10
bronchus
10
pituitary gland
9
breast
9
lymphatic vessel
7
tongue
7
urinary bladder
6
bone marrow
6
vagina
3
nose
3
trachea
Project
4534
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4529
hg19
359
GRCh38
1
hg18
annotation_type!
histone modifications
BIOSAMPLE
TYPE
4535 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
tissue
heart
37
20
1
5
2
stomach
40
21
3
kidney
29
14
1
10
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 173 more…
cell line
HeLa-S3
5
55
1
A549
21
19
2
1
H1-hESC
1
39
2
1
K562
7
23
2
1
1
HFFc6
19
+ See 639 more…
primary cell
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
CD4-positive, alpha-beta memory T cell
14
9
monocyte
1
1
17
1
1
+ See 232 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
10
adipocyte
4
6
1
4
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
1
5
+ See 79 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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