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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1218
target gene predictions
976
histone modifications
817
binding sites
633
accessible chromatin
123
variant allelic effects
11
caQTL
10
eQTL
6
chromatin state
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
292
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
99
October, 2022
66
January, 2020
51
August, 2021
45
March, 2020
41
November, 2022
August, 2017
30
February, 2023
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5476
bed bed3+
869
bed bed9
617
tsv
277
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5431
Homo sapiens
Biosample type
2120
cell line
1831
tissue
1178
primary cell
343
in vitro differentiated cells
3
stem cell
Organ
390
epithelium
306
kidney
303
brain
267
connective tissue
267
musculature of body
226
lung
205
intestine
188
bodily fluid
179
blood
175
embryo
175
limb
163
heart
154
skin of body
153
vasculature
128
large intestine
118
pancreas
117
blood vessel
109
extraembryonic component
94
eye
94
liver
83
stomach
74
uterus
67
bone element
66
mammary gland
63
prostate gland
59
small intestine
54
lymph node
54
penis
54
placenta
51
ureter
47
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
16
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
11
bronchus
11
pituitary gland
10
lymphatic vessel
9
breast
8
bone marrow
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5476
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5470
hg19
464
GRCh38
1
hg18
month_released!
August, 2017
BIOSAMPLE
TYPE
5476 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
caQTL
eQTL
chromatin state
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
MCF-7
9
6
2
3
1
+ See 759 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
+ See 215 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
common myeloid progenitor, CD34-positive
27
14
CD14-positive monocyte
8
19
B cell
14
10
2
+ See 253 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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