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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1264
candidate regulatory elements
920
target gene predictions
679
binding sites
673
histone modifications
360
accessible chromatin
42
variant allelic effects
30
chromatin state
5
eQTL
2
caQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
1913
February, 2021
1281
September, 2022
215
June, 2020
189
February, 2024
84
May, 2021
70
October, 2022
47
May, 2020
42
January, 2020
36
March, 2020
27
February, 2023
24
August, 2017
17
November, 2022
13
August, 2021
11
November, 2019
3
September, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3981
bed bed3+
665
bed bed9
234
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
3980
Homo sapiens
Biosample type
2125
cell line
1850
tissue
primary cell
in vitro differentiated cells
4
stem cell
Organ
275
brain
256
kidney
238
musculature of body
209
lung
205
intestine
181
bodily fluid
174
limb
172
blood
149
heart
138
embryo
131
large intestine
89
pancreas
85
epithelium
82
stomach
78
connective tissue
76
extraembryonic component
73
skin of body
72
eye
71
uterus
60
liver
60
small intestine
58
bone element
57
vasculature
55
prostate gland
54
lymph node
52
blood vessel
51
ureter
48
adipose tissue
47
placenta
46
adrenal gland
37
thymus
34
gonad
31
mammary gland
26
artery
26
spinal cord
26
spleen
24
esophagus
19
testis
18
lymphoid tissue
15
ovary
15
skeleton
14
nerve
14
thyroid gland
13
penis
11
pituitary gland
10
mouth
9
breast
7
tongue
7
urinary bladder
6
vagina
2
lymphatic vessel
2
vein
Project
3979
AMP
1
ITG
1
T1D
Genome assembly (visualization)
3979
hg19
271
GRCh38
1
hg18
biosample_type!
in vitro differentiated cells
primary cell
BIOSAMPLE
TYPE
3981 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
accessible chromatin
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
2
1
1
H1-hESC
1
39
2
1
1
K562
7
23
2
1
1
1
MCF-7
9
6
3
2
1
+ See 760 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
kidney
29
14
1
2
10
1
1
brain
29
16
1
3
2
1
muscle of arm
33
16
1
1
+ See 217 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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