Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
478
accessible chromatin
369
target gene predictions
324
candidate regulatory elements
210
histone modifications
77
binding sites
75
variant allelic effects
6
chromatin state
5
eQTL
4
caQTL
3
hQTL
2
meQTL
1
other
Date released
332
February, 2021
330
November, 2021
323
September, 2022
179
May, 2021
103
February, 2024
81
May, 2020
56
January, 2021
52
June, 2020
October, 2022
21
January, 2020
18
April, 2020
16
August, 2021
13
May, 2022
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1554
bed bed3+
586
tsv
407
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1509
Homo sapiens
Biosample type
2053
cell line
1850
tissue
1554
primary cell
345
in vitro differentiated cells
4
stem cell
Organ
439
epithelium
196
connective tissue
100
vasculature
80
skin of body
70
pancreas
69
blood vessel
51
kidney
38
liver
38
musculature of body
37
mammary gland
33
penis
31
extraembryonic component
29
brain
28
lung
24
heart
23
intestine
19
artery
19
eye
18
embryo
14
bronchus
14
vein
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
8
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1149
AMP
330
ENCODE
57
T1D
18
LungMap
Genome assembly (visualization)
1550
hg19
494
GRCh38
organ_slims!
lymphatic vessel
month_released!
October, 2022
BIOSAMPLE
TYPE
1554 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
14
endothelial cell
15
7
1
2
2
1
1
+ See 326 more…
See all biosamples
Download