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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
325
accessible chromatin
258
target gene predictions
242
candidate regulatory elements
193
histone modifications
70
binding sites
40
variant allelic effects
9
caQTL
4
eQTL
3
chromatin state
3
hQTL
2
meQTL
1
other
Date released
255
February, 2021
236
September, 2022
206
November, 2021
170
May, 2021
71
May, 2020
55
February, 2024
38
June, 2020
36
January, 2021
25
October, 2022
12
April, 2020
11
May, 2022
10
January, 2020
9
November, 2022
5
August, 2021
3
August, 2017
3
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
Available data
1150
bed bed3+
286
tsv
259
bigWig
120
bed bed9
30
txt
27
bed bed9+
2
bigBed bed9
2
bigBed narrowPeak
Organism
1105
Homo sapiens
Biosample type
2094
cell line
1796
tissue
1150
primary cell
330
in vitro differentiated cells
4
stem cell
Organ
epithelium
208
connective tissue
104
vasculature
83
skin of body
71
blood vessel
70
pancreas
52
kidney
41
musculature of body
39
mammary gland
38
liver
35
penis
32
extraembryonic component
31
brain
30
lung
24
heart
23
intestine
20
artery
20
eye
18
embryo
15
vein
14
bronchus
12
bone element
11
adrenal gland
11
bone marrow
11
stomach
10
lymphatic vessel
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
893
AMP
206
ENCODE
39
T1D
12
LungMap
Genome assembly (visualization)
1145
hg19
334
GRCh38
organ_slims!
epithelium
BIOSAMPLE
TYPE
1150 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
caQTL
eQTL
chromatin state
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
B cell
6
10
14
CD14-positive monocyte
19
8
fibroblast
16
4
1
6
CD4-positive, alpha-beta memory T cell
9
14
pericyte cell
10
10
1
macrophage
12
3
3
1
smooth muscle cell
9
6
2
1
1
T cell
6
4
4
2
regulatory T cell
5
4
5
1
1
CD8-positive, alpha-beta memory T cell
7
8
astrocyte
8
4
2
1
foreskin fibroblast
1
2
6
2
4
natural killer cell
3
5
6
1
mononuclear cell
6
7
1
osteoblast
5
2
2
2
3
trophoblast cell
1
5
7
1
fibroblast of lung
4
6
2
1
CD4-positive, alpha-beta T cell
1
3
8
T-helper 1 cell
3
3
6
excitatory neuron
12
skeletal muscle myoblast
2
2
4
1
2
1
T-helper 17 cell
2
3
5
T-helper 2 cell
2
3
5
neurosphere
3
7
erythroblast
5
2
2
fibroblast of cardiac tissue
2
4
3
fibroblast of dermis
4
4
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
2
4
1
1
neutrophil
3
4
1
1
skeletal muscle satellite cell
5
2
2
glutamatergic neuron
6
2
cardiac muscle cell
1
1
2
1
2
fibroblast of mammary gland
1
1
2
1
2
fibroblast of pulmonary artery
1
1
2
1
2
fibroblast of villous mesenchyme
1
1
2
1
2
skeletal muscle fiber
5
2
skin fibroblast
2
3
2
CD1c-positive myeloid dendritic cell
1
1
2
1
1
T-cell
2
4
fibroblast of breast
2
4
hepatic stellate cell
3
1
1
1
memory B cell
4
2
naive T cell
3
3
olfactory receptor cell
6
peripheral blood mononuclear cell
4
1
1
type I muscle cell
3
1
1
1
type II muscle cell
3
1
1
1
cardiac fibroblast
3
2
CD4-positive helper T cell
1
2
2
astrocyte of the cerebellum
1
1
2
1
astrocyte of the hippocampus
1
1
2
1
basal cell
2
1
2
foreskin melanocyte
1
4
gabaergic neuron
3
2
inhibitory neuron
5
mast cell
1
1
1
1
1
mesenchymal stem cell
2
1
1
1
myofibroblast cell
1
1
3
naive B cell
3
2
naive thymus-derived CD8-positive, alpha-beta T cell
3
2
plasma cell
2
1
1
1
skeletal muscle cell
1
1
2
1
smooth muscle cell of the brain vasculature
1
1
2
1
acute myeloid leukemia cell
2
2
aortic adventitial fibroblast
1
1
2
blood vessel smooth muscle cell
2
2
cardiac fibroblast
3
1
enteric smooth muscle cell
2
2
fibroblast of peridontal ligament
1
1
2
fibroblast of the aortic adventitia
1
2
1
megakaryocyte
2
2
preadipocyte
1
2
1
renal epithelial cell
1
1
2
smooth muscle cell of the esophagus
2
2
Ishikawa
1
1
1
Th1 cell
1
1
1
Th17 cell
1
1
1
activated CD4-positive, alpha-beta T cell
1
2
adipocyte
2
1
astrocyte of the spinal cord
1
2
bone marrow cell
2
1
brain pericyte
1
1
1
ciliated cell
2
1
enteric neuron
2
1
erythroid cell
1
1
1
fibroblast of gingiva
1
2
fibroblast of the conjunctiva
1
2
mammary epithelial cell
3
mononuclear cell of bone marrow
1
2
myotube
1
2
naive t cell
1
1
1
neoplastic cell
1
1
1
oligodendrocyte
2
1
oligodendrocyte precursor cell
2
1
pancreatic stellate cell
2
1
peripheral blood stem cell
1
1
1
plasmacytoid dendritic cell
2
1
pre-B acute lymphoblastic leukemia cell
2
1
pulmonary interstitial fibroblast
1
1
1
schwann cell
2
1
stromal cell of bone marrow
1
2
Adipose stromal cell
1
1
B-lymphocyte
1
1
CD34-positive, CD38-negative hematopoietic stem cell
1
1
Muller cell
2
Rhabdoid Tumor of the Kidney
1
1
Schwann cell
2
T follicular helper cell
2
Th2 cell
1
1
activated CD8-positive, alpha-beta T cell
1
1
alveolar macrophage
1
1
amnion mesenchymal stem cell
1
1
amniotic stem cell
1
1
cardiac muscle myoblast
1
1
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
1
1
colon goblet cell
1
1
columnar chondrocyte
1
1
conventional dendritic cell
1
1
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
erythroid progenitor cell
1
1
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
head and neck squamous cell carcinoma
1
1
intestinal tuft cell
1
1
leukemic stem cell
1
1
leukocyte
2
luteal cell
1
1
mammary stem cell
1
1
mantle cell lymphoma cell
2
mature NK T cell
1
1
mature natural killer cell
2
mature neutrophil
1
1
melanocyte
1
1
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
microglial cell
1
1
naive regulatory T cell
2
natural killer cell mediated cytotoxicity
1
1
neuron
2
neuronal stem cell
1
1
non-classical monocyte
1
1
pancreatic endocrine cell
1
1
peripheral blood-derived erythroblast
2
primordial germ cell
1
1
prostate gland cancer cell
1
1
regular atrial cardiac myocyte
1
1
regular cardiac myocyte
1
1
renal proximal tubule cell
1
1
skeletal muscle fibroblast
1
1
small cell ovarian carcinoma cell
1
1
smooth muscle cell of the coronary artery
1
1
somatic muscle myotube
1
1
stellate neuron
1
1
stromal cell
1
1
uterine smooth muscle cell
1
1
vascular associated smooth muscle cell
2
ventricular cardiac muscle cell
1
1
B cell, CD19-positive
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
acute myeloid leukemia
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
alveolar cell type II
1
aortic smooth muscle cell
1
bone cell
1
cell
1
colorectal cancer
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of artery
1
erythrocyte
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
granulocyte
1
head and neck neoplasia
1
hepatoblast
1
immature natural killer cell
1
induced T-regulatory cell
1
inflammatory macrophage
1
islet of Langerhans
1
kidney interstitial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
megakaryocyte-erythroid progenitor cell
1
meningioma cell
1
metanephros
1
microglial cell/astrocyte
1
mycosis fungoides
1
myeloid dendritic cell
1
myeloid leukocyte
1
neural cell
1
neural progenitor cell
1
neutrophil progenitor cell
1
non-neuronal cell
1
pancreatic immune cell
1
peripheral blood
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
proximal tubule cells with injury markers
1
retinal bipolar neuron
1
seminoma cell
1
somatic gonadal cell
1
sperm
1
sympathetic neuron
1
trophoblast giant cell
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
1
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