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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
817
binding sites
615
accessible chromatin
124
variant allelic effects
77
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
290
May, 2021
June, 2020
138
May, 2020
101
October, 2022
72
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
35
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
14
November, 2019
14
October, 2019
9
May, 2019
8
April, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5635
bed bed3+
898
tsv
869
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5626
Homo sapiens
Biosample type
1973
cell line
1815
tissue
1547
primary cell
331
in vitro differentiated cells
4
stem cell
Organ
525
epithelium
311
connective tissue
297
kidney
294
brain
278
musculature of body
233
lung
218
intestine
178
bodily fluid
178
heart
173
limb
169
blood
168
embryo
165
vasculature
157
skin of body
155
pancreas
130
large intestine
127
blood vessel
106
extraembryonic component
97
liver
92
eye
90
stomach
74
uterus
69
mammary gland
65
bone element
63
small intestine
58
prostate gland
56
adrenal gland
54
placenta
51
penis
50
ureter
48
adipose tissue
46
lymph node
45
artery
37
thymus
33
gonad
31
esophagus
27
spinal cord
25
spleen
18
vein
17
testis
16
lymphoid tissue
16
ovary
16
thyroid gland
15
skeleton
14
nerve
13
bronchus
13
lymphatic vessel
12
mouth
11
bone marrow
11
pituitary gland
8
breast
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
5259
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5664
hg19
831
GRCh38
1
hg18
month_released!
June, 2020
BIOSAMPLE
TYPE
5672 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 743 more…
tissue
heart
37
20
1
1
3
2
2
stomach
40
21
1
kidney
29
14
2
1
9
1
2
1
brain
29
16
3
1
1
1
2
muscle of arm
33
16
1
1
+ See 214 more…
primary cell
monocyte
2
86
1
16
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 324 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
1
3
4
embryonic stem cell
1
1
1
5
5
T-cell acute lymphoblastic leukemia
5
3
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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