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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1617
candidate regulatory elements
1323
target gene predictions
968
histone modifications
859
accessible chromatin
796
binding sites
111
variant allelic effects
68
chromatin state
10
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2355
February, 2021
1621
September, 2022
327
November, 2021
287
May, 2021
282
June, 2020
281
February, 2024
125
May, 2020
97
October, 2022
58
January, 2020
56
January, 2021
52
August, 2021
42
March, 2020
41
November, 2022
34
August, 2017
27
February, 2023
16
April, 2020
15
May, 2022
12
October, 2019
11
November, 2019
8
April, 2019
8
May, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5745
bed bed3+
836
tsv
834
bed bed9
507
bigWig
106
txt
34
bed bed9+
32
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5728
Homo sapiens
Biosample type
2115
cell line
1810
tissue
1493
primary cell
350
in vitro differentiated cells
4
stem cell
Organ
549
epithelium
331
connective tissue
315
brain
311
kidney
284
musculature of body
239
lung
228
intestine
190
bodily fluid
183
heart
181
blood
179
limb
178
embryo
vasculature
165
skin of body
159
pancreas
137
large intestine
131
blood vessel
112
extraembryonic component
102
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
48
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
19
vein
18
lymphoid tissue
17
ovary
17
thyroid gland
15
nerve
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5370
AMP
327
ENCODE
60
T1D
16
LungMap
1
ITG
Genome assembly (visualization)
5769
hg19
779
GRCh38
1
hg18
organ_slims!
vasculature
skeleton
BIOSAMPLE
TYPE
5774 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 756 more…
tissue
heart
37
20
1
5
1
2
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
2
1
brain
29
16
3
2
1
1
2
muscle of arm
33
16
1
1
+ See 200 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 306 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
5
1
5
mesenchymal stem cell
3
3
1
1
1
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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