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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1355
target gene predictions
892
accessible chromatin
834
candidate regulatory elements
463
gene expression
158
differential activity
136
histone modifications
123
variant allelic effects
99
binding sites
72
Fine-mapped variants
40
chromatin state
35
eQTL
13
caQTL
4
variant to gene
3
hQTL
2
meQTL
2
other
2
pQTL
1
sQTL
Date released
February, 2021
1678
September, 2022
373
May, 2021
360
February, 2024
333
November, 2021
288
June, 2020
286
September, 2023
135
May, 2020
124
March, 2020
101
August, 2021
101
October, 2022
83
January, 2020
57
March, 2023
56
January, 2021
47
February, 2020
41
November, 2022
34
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3514
bed bed3+
869
bed bed9
720
tsv
532
bigWig
40
bigBed bed9
34
bed bed9+
25
txt
24
csv
13
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4187
Homo sapiens
Biosample type
1728
primary cell
1424
tissue
843
cell line
233
in vitro differentiated cells
4
stem cell
Organ
675
epithelium
372
kidney
285
connective tissue
266
brain
205
pancreas
204
musculature of body
178
vasculature
170
lung
160
intestine
154
heart
135
embryo
134
blood vessel
134
limb
117
bodily fluid
112
blood
103
liver
99
skin of body
93
large intestine
83
eye
79
extraembryonic component
68
uterus
66
stomach
49
adipose tissue
47
artery
46
small intestine
45
mammary gland
44
adrenal gland
38
bone element
38
placenta
35
prostate gland
33
ureter
27
gonad
27
lymph node
27
thymus
26
penis
25
esophagus
25
spinal cord
17
nerve
17
spleen
14
lymphatic vessel
14
lymphoid tissue
14
ovary
14
thyroid gland
12
testis
11
pituitary gland
11
vein
10
mouth
9
bronchus
7
breast
7
urinary bladder
6
bone marrow
6
skeleton
6
tongue
5
vagina
3
nose
1
trachea
Project
3540
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3602
hg19
895
GRCh38
1
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
4234 results
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table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
gene expression
differential activity
histone modifications
variant allelic effects
binding sites
Fine-mapped variants
chromatin state
eQTL
caQTL
variant to gene
hQTL
meQTL
other
pQTL
sQTL
primary cell
monocyte
2
18
15
84
1
1
CD8-positive, alpha-beta T cell
5
4
3
30
endothelial cell
7
15
4
2
1
2
B cell
10
6
9
2
common myeloid progenitor, CD34-positive
14
13
+ See 363 more…
tissue
heart
20
5
19
2
2
stomach
21
3
19
1
kidney
14
10
14
1
1
brain
16
2
16
1
1
lung
17
16
1
+ See 179 more…
cell line
HeLa-S3
55
3
1
H1-hESC
39
1
1
8
1
A549
19
1
18
1
K562
23
1
6
1
1
EndoC_BH1
1
8
8
1
1
+ See 265 more…
in vitro differentiated cells
neural progenitor cell
5
10
4
7
13
hematopoietic multipotent progenitor cell
10
1
10
1
adipocyte
6
4
2
4
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
+ See 63 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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