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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
817
binding sites
590
accessible chromatin
123
variant allelic effects
40
chromatin state
10
eQTL
8
caQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5604
bed bed3+
899
tsv
869
bed bed9
527
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5559
Homo sapiens
Biosample type
1973
cell line
1761
tissue
1539
primary cell
326
in vitro differentiated cells
4
stem cell
Organ
512
epithelium
309
connective tissue
295
kidney
288
brain
275
musculature of body
233
lung
218
intestine
178
bodily fluid
169
blood
169
limb
168
embryo
165
heart
157
skin of body
155
pancreas
153
vasculature
130
large intestine
115
blood vessel
106
extraembryonic component
96
liver
90
stomach
74
uterus
69
mammary gland
68
eye
65
bone element
63
small intestine
58
prostate gland
56
adrenal gland
54
placenta
51
penis
50
ureter
48
adipose tissue
46
lymph node
40
artery
37
thymus
33
gonad
31
esophagus
27
spinal cord
25
spleen
17
testis
16
lymphoid tissue
16
ovary
16
thyroid gland
16
vein
15
skeleton
13
bronchus
13
lymphatic vessel
13
nerve
12
mouth
11
bone marrow
11
pituitary gland
8
breast
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
5192
AMP
333
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5601
hg19
794
GRCh38
1
hg18
month_released!
February, 2023
June, 2020
BIOSAMPLE
TYPE
5604 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 743 more…
tissue
heart
37
20
1
1
3
2
stomach
40
21
1
kidney
29
14
2
1
9
1
1
brain
29
16
3
1
1
1
muscle of arm
33
16
1
1
+ See 214 more…
primary cell
monocyte
2
86
1
16
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
1
1
+ See 324 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
1
3
4
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
1
5
+ See 98 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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