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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1669
candidate regulatory elements
1183
target gene predictions
976
histone modifications
851
accessible chromatin
811
binding sites
68
variant allelic effects
35
chromatin state
13
caQTL
3
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5621
bed bed3+
864
bed bed9
831
tsv
499
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
5
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5575
Homo sapiens
Biosample type
1957
cell line
1827
tissue
1487
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
484
epithelium
315
connective tissue
309
brain
308
kidney
272
musculature of body
238
lung
222
intestine
175
limb
167
heart
164
skin of body
162
bodily fluid
153
blood
151
vasculature
134
large intestine
133
pancreas
127
embryo
113
blood vessel
112
extraembryonic component
97
eye
91
stomach
85
liver
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
25
uterus
19
testis
17
lymphoid tissue
17
ovary
17
vein
16
thyroid gland
15
skeleton
14
lymphatic vessel
14
nerve
13
bronchus
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5209
AMP
333
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5613
hg19
585
GRCh38
1
hg18
month_released!
October, 2019
February, 2024
BIOSAMPLE
TYPE
5621 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
K562
7
7
1
1
2
1
HepG2
2
3
5
2
3
1
+ See 753 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 206 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
13
10
6
CD14-positive monocyte
8
19
+ See 318 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
2
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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