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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
970
histone modifications
897
accessible chromatin
839
candidate regulatory elements
817
binding sites
518
target gene predictions
124
variant allelic effects
76
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
September, 2022
2409
February, 2021
333
November, 2021
293
February, 2024
290
May, 2021
288
June, 2020
138
May, 2020
101
October, 2022
72
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
14
November, 2019
14
October, 2019
9
May, 2019
8
April, 2019
5
January, 2022
September, 2023
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4240
bed bed3+
619
tsv
542
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4230
Homo sapiens
Biosample type
1762
cell line
1272
primary cell
959
tissue
278
in vitro differentiated cells
3
stem cell
Organ
446
epithelium
249
connective tissue
192
brain
161
kidney
148
musculature of body
140
bodily fluid
135
blood
128
pancreas
124
embryo
120
vasculature
119
intestine
111
heart
99
lung
97
skin of body
90
blood vessel
87
limb
80
eye
72
large intestine
69
liver
68
uterus
47
stomach
46
extraembryonic component
45
mammary gland
42
bone element
38
lymph node
37
prostate gland
34
penis
33
adipose tissue
33
artery
29
adrenal gland
26
small intestine
25
ureter
24
placenta
21
gonad
19
esophagus
16
thymus
15
vein
14
spleen
13
spinal cord
11
pituitary gland
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
nerve
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3863
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4268
hg19
825
GRCh38
1
hg18
month_released!
September, 2022
September, 2023
BIOSAMPLE
TYPE
4276 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 741 more…
primary cell
monocyte
86
18
1
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
5
endothelial cell
1
15
2
7
2
2
1
fibroblast
16
1
4
6
CD14-positive monocyte
4
15
+ See 321 more…
tissue
kidney
2
10
15
1
1
2
1
heart
1
5
18
1
1
2
2
retina
1
23
3
1
1
stomach
1
3
21
2
brain
3
2
13
1
1
2
+ See 212 more…
in vitro differentiated cells
neural progenitor cell
14
10
1
1
adipocyte
1
4
2
1
4
4
embryonic stem cell
1
5
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
T-cell acute lymphoblastic leukemia
5
3
+ See 97 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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