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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
970
histone modifications
897
accessible chromatin
839
candidate regulatory elements
817
binding sites
523
target gene predictions
124
variant allelic effects
39
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4244
bed bed3+
900
tsv
542
bigWig
108
txt
34
bed bed9+
33
bigBed bed9
29
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
4198
Homo sapiens
Biosample type
1762
cell line
1268
primary cell
931
tissue
277
in vitro differentiated cells
4
stem cell
Organ
444
epithelium
250
connective tissue
189
brain
159
kidney
145
musculature of body
140
bodily fluid
135
blood
127
pancreas
124
embryo
119
intestine
112
vasculature
101
heart
99
lung
97
skin of body
83
limb
82
blood vessel
80
eye
72
large intestine
69
liver
68
uterus
47
stomach
46
extraembryonic component
45
mammary gland
42
bone element
38
lymph node
37
prostate gland
34
penis
33
adipose tissue
31
artery
29
adrenal gland
26
small intestine
25
ureter
24
placenta
21
gonad
19
esophagus
16
thymus
14
spleen
13
spinal cord
13
vein
11
pituitary gland
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
8
nerve
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3831
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4236
hg19
794
GRCh38
1
hg18
month_released!
September, 2022
April, 2019
BIOSAMPLE
TYPE
4244 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 741 more…
primary cell
monocyte
86
18
1
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
5
endothelial cell
1
15
2
7
2
2
1
fibroblast
16
1
4
6
CD14-positive monocyte
4
15
+ See 321 more…
tissue
kidney
2
10
15
1
1
1
retina
1
23
3
1
1
heart
1
5
18
1
1
2
stomach
1
3
21
2
brain
3
2
13
1
1
+ See 212 more…
in vitro differentiated cells
neural progenitor cell
14
10
1
1
adipocyte
1
4
2
1
4
4
hematopoietic multipotent progenitor cell
1
1
9
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
5
1
1
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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