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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
871
accessible chromatin
856
histone modifications
839
candidate regulatory elements
817
binding sites
384
target gene predictions
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2409
February, 2021
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3960
bed bed3+
812
tsv
529
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
31
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
3914
Homo sapiens
Biosample type
1707
cell line
1089
primary cell
903
tissue
255
in vitro differentiated cells
4
stem cell
Organ
427
epithelium
237
connective tissue
178
brain
159
kidney
139
musculature of body
136
bodily fluid
131
blood
119
embryo
113
intestine
113
pancreas
109
vasculature
98
heart
95
lung
92
skin of body
80
eye
80
limb
79
blood vessel
67
large intestine
66
liver
66
uterus
45
stomach
43
extraembryonic component
43
mammary gland
42
bone element
37
lymph node
35
prostate gland
33
penis
30
adipose tissue
29
artery
27
adrenal gland
25
small intestine
25
ureter
23
placenta
20
gonad
19
esophagus
15
thymus
13
spleen
12
spinal cord
12
vein
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
skeleton
8
lymphoid tissue
8
nerve
8
ovary
8
thyroid gland
5
mouth
5
trachea
4
breast
3
tongue
3
urinary bladder
2
vagina
1
nose
1
pituitary gland
Project
3547
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3952
hg19
697
GRCh38
1
hg18
month_released!
September, 2022
May, 2021
BIOSAMPLE
TYPE
3960 results
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Clear Filters
accessible chromatin
histone modifications
candidate regulatory elements
binding sites
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
2
1
51
H1-hESC
1
1
2
37
K562
1
1
1
2
16
1
breast cancer cell
11
9
HFFc6
19
+ See 738 more…
primary cell
endothelial cell
15
1
2
7
2
2
1
fibroblast
16
1
4
6
macrophage
12
3
3
1
pericyte cell
10
9
smooth muscle cell
9
6
2
1
1
+ See 317 more…
tissue
kidney
10
2
15
1
1
1
retina
23
1
3
1
1
heart
5
1
18
1
1
2
stomach
3
1
21
brain
2
3
13
1
1
+ See 209 more…
in vitro differentiated cells
neural progenitor cell
10
14
1
1
adipocyte
4
1
2
1
4
hematopoietic multipotent progenitor cell
1
1
9
1
T-cell acute lymphoblastic leukemia
5
3
neuroblastoma cell line
6
2
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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