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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1601
candidate regulatory elements
1279
target gene predictions
937
histone modifications
867
accessible chromatin
758
binding sites
121
variant allelic effects
36
chromatin state
12
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
1
pQTL
1
sQTL
Date released
2313
February, 2021
1596
September, 2022
328
November, 2021
278
May, 2021
271
June, 2020
249
February, 2024
133
May, 2020
81
October, 2022
64
January, 2020
56
January, 2021
47
August, 2021
42
March, 2020
41
November, 2022
31
February, 2023
30
August, 2017
19
April, 2020
13
May, 2022
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
2
November, 2020
2
September, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5632
bed bed3+
869
tsv
830
bed bed9
523
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
5586
Homo sapiens
Biosample type
1920
cell line
1814
tissue
1548
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5224
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5625
hg19
740
GRCh38
organ_slims!
bodily fluid
liver
BIOSAMPLE
TYPE
5632 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
pQTL
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 727 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 214 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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