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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1512
candidate regulatory elements
1171
target gene predictions
970
histone modifications
810
binding sites
635
accessible chromatin
113
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2314
February, 2021
1528
September, 2022
November, 2021
292
February, 2024
285
May, 2021
274
June, 2020
121
May, 2020
99
October, 2022
56
January, 2021
52
January, 2020
45
March, 2020
41
November, 2022
36
August, 2021
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5284
bed bed3+
792
bed bed9
649
tsv
291
bigWig
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5238
Homo sapiens
Biosample type
2094
cell line
1625
tissue
1213
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
420
epithelium
309
brain
kidney
280
connective tissue
270
musculature of body
230
lung
209
intestine
190
bodily fluid
181
blood
176
embryo
175
limb
163
heart
157
vasculature
155
skin of body
141
pancreas
131
large intestine
120
blood vessel
109
extraembryonic component
96
liver
94
eye
84
stomach
74
uterus
69
bone element
67
mammary gland
63
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
ureter
49
adipose tissue
47
adrenal gland
46
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
vein
15
ovary
15
skeleton
15
thyroid gland
14
nerve
13
mouth
12
bronchus
11
lymphatic vessel
11
pituitary gland
10
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5204
AMP
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5276
hg19
443
GRCh38
1
hg18
organ_slims!
kidney
ureter
month_released!
November, 2021
BIOSAMPLE
TYPE
5284 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 751 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
lung
33
17
+ See 201 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
3
CD14-positive monocyte
8
19
+ See 253 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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