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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
953
histone modifications
836
accessible chromatin
797
binding sites
725
candidate regulatory elements
466
target gene predictions
113
variant allelic effects
39
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2261
February, 2021
September, 2022
328
November, 2021
280
May, 2021
264
June, 2020
241
February, 2024
121
May, 2020
98
October, 2022
56
January, 2021
52
January, 2020
44
March, 2020
41
November, 2022
36
August, 2021
33
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
3962
bed bed3+
639
tsv
504
bigWig
38
bigBed bed9
34
bed bed9
34
bed bed9+
24
csv
21
txt
15
bigBed narrowPeak
1
bam
Organism
3916
Homo sapiens
Biosample type
1656
cell line
1224
primary cell
811
tissue
266
in vitro differentiated cells
3
stem cell
Organ
444
epithelium
250
connective tissue
189
brain
kidney
145
musculature of body
140
bodily fluid
135
blood
128
pancreas
embryo
119
intestine
112
vasculature
101
heart
99
lung
97
skin of body
83
limb
82
blood vessel
80
eye
72
large intestine
69
liver
68
uterus
47
stomach
46
extraembryonic component
45
mammary gland
42
bone element
38
lymph node
37
prostate gland
34
penis
33
adipose tissue
31
artery
29
adrenal gland
26
small intestine
25
ureter
24
placenta
21
gonad
19
esophagus
16
thymus
14
spleen
13
spinal cord
13
vein
11
pituitary gland
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
8
nerve
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3554
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
3954
hg19
714
GRCh38
1
hg18
organ_slims!
kidney
embryo
month_released!
September, 2022
BIOSAMPLE
TYPE
3962 results
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Clear Filters
histone modifications
accessible chromatin
binding sites
candidate regulatory elements
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
1
2
52
K562
1
1
2
1
17
1
breast cancer cell
11
9
HFFc6
19
GM12878
1
1
2
1
7
1
+ See 715 more…
primary cell
monocyte
86
18
1
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
5
endothelial cell
1
15
2
7
2
2
1
fibroblast
16
1
4
6
CD14-positive monocyte
4
15
+ See 299 more…
tissue
retina
1
23
1
3
1
heart
1
5
1
18
1
2
stomach
1
3
21
2
brain
3
2
1
13
1
pigmented layer of retina
20
+ See 190 more…
in vitro differentiated cells
neural progenitor cell
14
10
1
1
adipocyte
1
4
1
2
4
4
hematopoietic multipotent progenitor cell
1
1
1
9
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
5
1
1
+ See 95 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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