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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1401
candidate regulatory elements
1206
target gene predictions
922
histone modifications
812
accessible chromatin
794
binding sites
103
variant allelic effects
34
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2205
February, 2021
1408
September, 2022
330
November, 2021
292
February, 2024
274
May, 2021
253
June, 2020
109
May, 2020
93
October, 2022
56
January, 2021
43
March, 2020
41
November, 2022
36
August, 2021
34
January, 2020
31
February, 2023
28
August, 2017
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
2
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5305
bed bed3+
726
bed bed9
582
tsv
489
bigWig
34
bed bed9+
32
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5259
Homo sapiens
Biosample type
2028
cell line
1512
primary cell
1417
tissue
343
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
330
connective tissue
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4895
AMP
330
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5297
hg19
752
GRCh38
1
hg18
organ_slims!
kidney
brain
BIOSAMPLE
TYPE
5305 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 737 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 303 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
muscle of arm
33
16
1
1
lung
33
17
small intestine
29
17
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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