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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1366
candidate regulatory elements
1202
target gene predictions
963
histone modifications
827
accessible chromatin
803
binding sites
106
variant allelic effects
37
chromatin state
11
caQTL
6
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2223
February, 2021
1392
September, 2022
319
November, 2021
283
February, 2024
279
May, 2021
268
June, 2020
116
May, 2020
96
October, 2022
56
January, 2021
47
January, 2020
42
March, 2020
41
November, 2022
36
August, 2021
31
August, 2017
31
February, 2023
19
April, 2020
13
November, 2019
12
May, 2022
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5333
bed bed3+
721
bed bed9
635
tsv
494
bigWig
35
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5287
Homo sapiens
Biosample type
2080
cell line
1502
primary cell
1401
tissue
344
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
kidney
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
4934
AMP
319
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5325
hg19
757
GRCh38
1
hg18
organ_slims!
kidney
musculature of body
BIOSAMPLE
TYPE
5333 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 748 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 302 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
lung
33
17
small intestine
29
17
1
+ See 182 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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