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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1483
candidate regulatory elements
1264
target gene predictions
967
histone modifications
807
binding sites
799
accessible chromatin
113
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2296
February, 2021
1496
September, 2022
328
November, 2021
292
February, 2024
284
May, 2021
272
June, 2020
121
May, 2020
98
October, 2022
56
January, 2021
January, 2020
45
March, 2020
41
November, 2022
36
August, 2021
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5506
bed bed3+
770
bed bed9
632
tsv
457
bigWig
34
bed bed9+
32
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5460
Homo sapiens
Biosample type
2092
cell line
1545
tissue
1520
primary cell
343
in vitro differentiated cells
4
stem cell
Organ
535
epithelium
321
connective tissue
kidney
291
brain
276
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
169
limb
165
skin of body
164
heart
156
pancreas
153
vasculature
137
large intestine
118
blood vessel
112
extraembryonic component
99
liver
96
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5098
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5498
hg19
723
GRCh38
1
hg18
organ_slims!
kidney
placenta
month_released!
January, 2020
BIOSAMPLE
TYPE
5506 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 750 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 199 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 308 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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