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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1483
candidate regulatory elements
1265
target gene predictions
967
histone modifications
838
accessible chromatin
807
binding sites
113
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2296
February, 2021
1496
September, 2022
328
November, 2021
292
February, 2024
284
May, 2021
272
June, 2020
121
May, 2020
98
October, 2022
56
January, 2021
52
January, 2020
45
March, 2020
41
November, 2022
36
August, 2021
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5545
bed bed3+
775
bed bed9
649
tsv
496
bigWig
37
bigBed bed9
34
bed bed9+
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5499
Homo sapiens
Biosample type
2091
cell line
1571
tissue
1534
primary cell
344
in vitro differentiated cells
4
stem cell
Organ
546
epithelium
330
connective tissue
309
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
173
limb
170
heart
165
skin of body
160
vasculature
157
pancreas
137
large intestine
120
blood vessel
112
extraembryonic component
100
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
44
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
13
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5137
AMP
328
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5537
hg19
759
GRCh38
1
hg18
organ_slims!
kidney
placenta
month_released!
November, 2019
BIOSAMPLE
TYPE
5545 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 750 more…
tissue
heart
37
20
1
4
1
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 200 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 308 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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