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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1569
candidate regulatory elements
1301
target gene predictions
974
histone modifications
881
accessible chromatin
815
binding sites
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2346
February, 2021
1578
September, 2022
331
November, 2021
281
June, 2020
281
May, 2021
237
February, 2024
98
October, 2022
72
May, 2020
60
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
34
August, 2017
30
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5615
bed bed3+
882
tsv
815
bed bed9
527
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
24
csv
12
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5570
Homo sapiens
Biosample type
2115
cell line
1638
tissue
1516
primary cell
341
in vitro differentiated cells
4
stem cell
Organ
509
epithelium
315
connective tissue
299
brain
298
kidney
274
musculature of body
238
lung
225
intestine
190
bodily fluid
181
blood
178
embryo
limb
164
skin of body
163
heart
150
vasculature
148
pancreas
137
large intestine
116
blood vessel
112
extraembryonic component
98
liver
96
eye
91
stomach
76
uterus
72
mammary gland
70
bone element
64
small intestine
62
prostate gland
56
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
46
adipose tissue
42
artery
38
thymus
37
gonad
31
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
ovary
17
vein
16
thyroid gland
15
skeleton
14
lymphatic vessel
13
bronchus
13
mouth
12
nerve
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5205
AMP
331
ENCODE
59
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5607
hg19
784
GRCh38
1
hg18
organ_slims!
ovary
limb
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
5615 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 758 more…
tissue
stomach
40
21
1
3
heart
37
20
1
5
1
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
lung
33
17
+ See 192 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
+ See 316 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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