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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1593
candidate regulatory elements
1301
target gene predictions
970
histone modifications
875
accessible chromatin
721
binding sites
111
variant allelic effects
35
chromatin state
10
eQTL
4
caQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2359
February, 2021
1598
September, 2022
321
November, 2021
288
February, 2024
282
June, 2020
281
May, 2021
125
May, 2020
October, 2022
57
January, 2020
56
January, 2021
52
August, 2021
41
November, 2022
38
March, 2020
34
August, 2017
28
February, 2023
19
April, 2020
15
May, 2022
10
November, 2019
8
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5632
bed bed3+
870
tsv
819
bed bed9
523
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5586
Homo sapiens
Biosample type
2047
cell line
1694
tissue
1538
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
541
epithelium
318
connective tissue
307
kidney
303
brain
278
musculature of body
235
lung
227
intestine
177
embryo
175
limb
heart
171
bodily fluid
162
blood
161
skin of body
159
pancreas
159
vasculature
136
large intestine
121
blood vessel
111
extraembryonic component
100
liver
96
eye
93
stomach
75
uterus
70
mammary gland
69
bone element
64
small intestine
63
prostate gland
57
adrenal gland
55
placenta
52
lymph node
52
penis
51
ureter
49
adipose tissue
45
artery
38
thymus
36
gonad
33
esophagus
28
spinal cord
26
spleen
18
lymphoid tissue
18
testis
ovary
17
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5233
AMP
321
ENCODE
58
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5628
hg19
764
GRCh38
1
hg18
organ_slims!
ovary
heart
month_released!
October, 2022
BIOSAMPLE
TYPE
5632 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
A549
21
19
1
1
1
H1-hESC
1
39
1
1
1
K562
7
23
1
1
1
1
MCF-7
9
6
2
1
2
+ See 756 more…
tissue
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 207 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
+ See 320 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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