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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
881
histone modifications
836
target gene predictions
773
binding sites
730
candidate regulatory elements
700
accessible chromatin
87
variant allelic effects
16
chromatin state
10
caQTL
5
eQTL
3
hQTL
2
meQTL
2
other
Date released
1784
February, 2021
753
September, 2022
333
November, 2021
272
February, 2024
255
May, 2021
222
June, 2020
100
October, 2022
90
May, 2020
56
January, 2021
40
August, 2021
25
January, 2020
24
November, 2022
19
April, 2020
16
August, 2017
15
March, 2020
13
May, 2022
7
October, 2019
5
January, 2022
5
September, 2023
4
February, 2023
4
November, 2019
2
November, 2020
1
June, 2021
Available data
4045
bed bed3+
682
tsv
423
bigWig
381
bed bed9
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
3999
Homo sapiens
Biosample type
2122
cell line
tissue
1570
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
493
epithelium
281
connective tissue
189
bodily fluid
181
blood
150
embryo
148
skin of body
116
vasculature
103
lung
101
brain
90
pancreas
84
kidney
76
blood vessel
71
mammary gland
67
uterus
66
liver
57
musculature of body
55
bone element
54
lymph node
53
intestine
52
penis
52
prostate gland
38
extraembryonic component
36
large intestine
35
eye
32
heart
artery
17
vein
14
bronchus
14
lymphatic vessel
11
adrenal gland
11
bone marrow
11
placenta
11
stomach
10
pituitary gland
9
esophagus
9
gonad
7
limb
6
mouth
6
spinal cord
6
testis
5
lymphoid tissue
trachea
4
adipose tissue
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
thymus
Project
3633
AMP
333
ENCODE
60
T1D
19
LungMap
Genome assembly (visualization)
4039
hg19
702
GRCh38
1
hg18
organ_slims!
trachea
artery
biosample_type!
tissue
BIOSAMPLE
TYPE
4045 results
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Clear Filters
histone modifications
target gene predictions
binding sites
candidate regulatory elements
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
cell line
HeLa-S3
55
1
5
A549
1
19
2
21
1
H1-hESC
1
39
2
1
1
K562
1
23
2
7
1
1
MCF-7
2
6
3
9
1
+ See 759 more…
primary cell
monocyte
86
2
1
18
1
1
CD8-positive, alpha-beta T cell
30
5
7
4
common myeloid progenitor, CD34-positive
14
27
B cell
10
14
6
endothelial cell
1
7
2
15
2
2
1
+ See 323 more…
in vitro differentiated cells
neural progenitor cell
14
5
5
10
hematopoietic multipotent progenitor cell
1
10
1
19
1
adipocyte
1
6
1
4
4
4
mesenchymal stem cell
1
3
1
3
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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