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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
223
accessible chromatin
187
candidate regulatory elements
175
target gene predictions
51
binding sites
41
variant allelic effects
34
histone modifications
8
chromatin state
4
eQTL
2
caQTL
Date released
182
September, 2022
171
February, 2021
127
November, 2021
61
February, 2024
32
June, 2020
25
May, 2021
20
January, 2021
16
November, 2022
15
January, 2020
15
May, 2020
12
August, 2021
11
February, 2023
8
August, 2017
7
April, 2020
7
October, 2022
5
March, 2020
5
October, 2019
2
May, 2022
2
September, 2018
1
November, 2019
Available data
725
bed bed3+
348
tsv
181
bigWig
90
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
725
Homo sapiens
Biosample type
445
primary cell
200
tissue
62
cell line
18
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
571
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
724
hg19
181
GRCh38
BIOSAMPLE
TYPE
725 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
2
hepatocyte
8
1
3
1
2
4
endothelial cell of umbilical vein
2
6
4
2
1
foreskin keratinocyte
11
4
keratinocyte
2
3
5
1
1
2
1
+ See 94 more…
tissue
large intestine
1
27
14
1
adipose tissue
2
7
8
1
1
1
pigmented layer of retina
20
sigmoid colon
1
10
7
transverse colon
1
8
5
+ See 28 more…
cell line
EndoC_BH1
8
1
1
HT-29
1
2
2
1
1
SW480
1
2
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 1 more…
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