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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
65
target gene predictions
34
accessible chromatin
19
binding sites
19
histone modifications
5
chromatin state
3
variant allelic effects
1
caQTL
Date released
97
September, 2022
68
February, 2021
19
February, 2024
12
June, 2020
11
November, 2021
8
May, 2021
5
August, 2017
4
August, 2021
4
March, 2020
2
January, 2020
2
May, 2020
2
May, 2022
2
October, 2022
1
November, 2019
1
September, 2018
Available data
238
bed bed3+
47
bed bed9
30
tsv
26
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
238
Homo sapiens
Biosample type
136
tissue
55
cell line
44
primary cell
3
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
227
AMP
11
ENCODE
Genome assembly (visualization)
237
hg19
40
GRCh38
1
hg18
BIOSAMPLE
TYPE
238 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
caQTL
tissue
large intestine
27
14
1
1
liver
13
10
4
1
2
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
colonic mucosa
4
2
1
1
+ See 6 more…
cell line
HepG2
2
3
2
3
5
1
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HuH-7
1
1
1
1
1
+ See 7 more…
primary cell
hepatocyte
1
3
8
1
4
2
endothelial cell of hepatic sinusoid
6
6
colon epithelial cell
3
3
hepatic stellate cell
1
1
3
1
Liver fetal (hepatocyte)
1
in vitro differentiated cells
hepatocyte
2
1
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