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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
290
candidate regulatory elements
153
target gene predictions
64
accessible chromatin
16
binding sites
12
variant allelic effects
10
histone modifications
2
eQTL
1
chromatin state
Date released
290
September, 2022
165
February, 2021
20
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
12
November, 2021
6
October, 2022
4
May, 2021
3
April, 2020
2
February, 2024
1
August, 2017
1
March, 2020
Available data
548
bed bed3+
252
tsv
147
bed bed9
87
txt
45
bigWig
2
bigBed bed9
Organism
548
Homo sapiens
Biosample type
361
tissue
104
cell line
82
primary cell
1
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
533
AMP
12
ENCODE
3
LungMap
Genome assembly (visualization)
548
hg19
36
GRCh38
BIOSAMPLE
TYPE
548 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
chromatin state
tissue
kidney
29
14
10
1
1
2
1
lung
33
17
left lung
26
13
right lung
22
11
1
renal cortex interstitium
20
9
1
1
+ See 15 more…
cell line
A549
21
19
1
2
1
HEK293
3
1
1
2
1
IMR-90
2
2
1
2
1
PC-9
2
2
1
1
1
WI38
5
1
+ See 12 more…
primary cell
fibroblast of lung
6
4
2
1
kidney tubule cell
3
2
2
type II pneumocyte
2
4
1
epithelial cell of proximal tubule
2
1
1
1
1
renal cortical epithelial cell
2
1
2
1
+ See 19 more…
in vitro differentiated cells
renal cell carcinoma
1
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